PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe2G040200.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 255aa    MW: 28538.4 Da    PI: 7.5286
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe2G040200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.55.1e-1375127155
                        CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                        ++ +hn+ Er RR+++Ns  ++L++llP+ +   + kKls  ++  ++ +YI +Lq
  Aqcoe2G040200.1.p  75 KKLNHNASERDRRKKLNSLCSTLQSLLPNiD---NTKKLSIPATICQVLKYIPQLQ 127
                        6789*************************88...8888*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.14E-1072131No hitNo description
SuperFamilySSF474591.28E-1572140IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.05674126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-1375141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-1075127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.5E-880132IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MLALSSSLFS PFAVPLLLED QICHEQDLKL NDPLMDFNHI NDWNNFDSFG CVSPLDNNLH  60
SAKHSSGTSS DPSTKKLNHN ASERDRRKKL NSLCSTLQSL LPNIDNTKKL SIPATICQVL  120
KYIPQLQSQV ERLKLRKETL SSISNQSDST HCTRQSNVLH PTGQSLPTVS ARRIDDSQVV  180
IHICTLKKNR SVFSEVLKIV EGDNLHILNA SVITSSENSL FYTLHVQVNG TQRVECEVLS  240
ERILSLCKKE EFFP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-39bHLH family protein